The Directorate of Maritime Operations (DMO) is the custodian of ships and boats. DMO is responsible for effective policing of the territorial and inland waters.

• The Patrol Vessel Squadron
• The Patrol Boat Squadron
• Technical Service Squadron
• Support Wing

DEER enforces all laws and regulations relating to KCGS functions, responds to emergencies and exercises powers relating to KCGS functions.

• Maritime Safety Enforcement
• Pollution Control
• Fisheries Enforcement and Marine Resource Protection
• Immigration Enforcement
• Customs Enforcement
• Department of Emergency Response
• Office of the KCGS Prosecutor

The Directorate of Support Services (DOSS) provides logistical and administrative support to KCGS.

• Department of Human Resources and Administration
• Department of Finance and Accounting
• Department of Procurement and Logistics
• Department of ICT

The Directorate of Logistics ensures operational readiness through comprehensive fleet management, technical maintenance, and infrastructure support.

• Fleet maintenance and operational readiness of Service vessels including SAR vessels
• Regular maintenance, repairs, and upgrades of Service assets
• Fleet planning, design, and modification
• Development of new vessels and application of new technologies
• Fleet engineering works with shipyards and contractors
• Maintenance of Service facilities including base stations and operational centers
• Management of telecommunications equipment and navigational aids
• Technical expertise on specialized systems
• Repair of radar, radio, and critical communication systems
• Design and development of User Service Specifications Requirements (USSR)
• Equipment records, inventory, and repair contract management
• Research analysis of emerging operational trends
• Maintenance of arms, artillery, and munitions records
• Arms and accessories repair and maintenance
• Training of Service Armourers
• Coordination of planned maintenance organization
• Oversight of dry docking and refit cycles
• Technical maintenance coordination with manufacturers
• Development of technical orders, SOPs, and regulations

The Directorate of Finance and Accounts provides comprehensive financial planning, management, controls, and reporting in accordance with the PFM Act of 2012.

• Development and implementation of financial policies and strategies
• Financial planning, management, and controls per PFM Act 2012
• Acquisition and distribution of funds
• Investment, costing, and financing advisory
• Implementation of financial regulations and policies
• Ensure prudent and efficient use of financial resources
• Budget preparation and cash flow projections
• Annual budget preparation per Government circular
• Revenue and treasury management
• Maintenance of books of accounts and financial records
• Budget implementation, monitoring, and review
• Development of internal financial controls
• Resource mobilization planning and coordination
• Preparation of financial reports and statements
• Maintenance and review of financial systems
• Compliance with financial statutory obligations
• Accounting coordination and policy interpretation
• Customer satisfaction surveys
• Business Process Re-Engineering initiatives
• Risk management register maintenance
• Business continuity plans monitoring
• Stakeholder engagement and corporate citizenship promotion